Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.39■□□□□ 0.05
FREM3P0C091 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.39■□□□□ 0.05
FREM3P0C091 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
FREM3P0C091 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.39■□□□□ 0.05
FREM3P0C091 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.39■□□□□ 0.05
FREM3P0C091 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FREM3P0C091 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.39■□□□□ 0.05
FREM3P0C091 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.39■□□□□ 0.05
FREM3P0C091 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
FREM3P0C091 AC092902.6-201ENST00000641783 218 ntBASIC15.39■□□□□ 0.05
FREM3P0C091 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.39■□□□□ 0.05
FREM3P0C091 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FREM3P0C091 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
FREM3P0C091 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
FREM3P0C091 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
FREM3P0C091 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
FREM3P0C091 PTCHD3P3-201ENST00000403073 906 ntBASIC15.38■□□□□ 0.05
FREM3P0C091 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.38■□□□□ 0.05
FREM3P0C091 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.38■□□□□ 0.05
FREM3P0C091 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.38■□□□□ 0.05
FREM3P0C091 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.38■□□□□ 0.05
FREM3P0C091 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 AC131009.4-201ENST00000624048 1740 ntBASIC15.38■□□□□ 0.05
FREM3P0C091 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 AC092068.3-201ENST00000587894 2016 ntBASIC15.38■□□□□ 0.05
FREM3P0C091 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.38■□□□□ 0.05
FREM3P0C091 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
FREM3P0C091 MKNK2P1-201ENST00000437526 628 ntBASIC15.38■□□□□ 0.05
FREM3P0C091 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.38■□□□□ 0.05
FREM3P0C091 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.38■□□□□ 0.05
FREM3P0C091 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
FREM3P0C091 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
FREM3P0C091 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.38■□□□□ 0.05
FREM3P0C091 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FREM3P0C091 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.38■□□□□ 0.05
FREM3P0C091 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
FREM3P0C091 AL121761.2-201ENST00000598007 1648 ntBASIC15.38■□□□□ 0.05
FREM3P0C091 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
FREM3P0C091 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 AC134684.3-201ENST00000641758 218 ntBASIC15.37■□□□□ 0.05
FREM3P0C091 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.37■□□□□ 0.05
FREM3P0C091 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
FREM3P0C091 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FREM3P0C091 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.37■□□□□ 0.05
FREM3P0C091 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.37■□□□□ 0.05
FREM3P0C091 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms