Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TPM1P09493 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM1P09493 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.76■□□□□ 0.59
TPM1P09493 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM1P09493 FAM220CP-201ENST00000395253 831 ntBASIC18.76■□□□□ 0.59
TPM1P09493 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TPM1P09493 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.76■□□□□ 0.59
TPM1P09493 HOMER2P1-201ENST00000455653 964 ntBASIC18.76■□□□□ 0.59
TPM1P09493 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.76■□□□□ 0.59
TPM1P09493 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM1P09493 STK25P1-201ENST00000585406 838 ntBASIC18.76■□□□□ 0.59
TPM1P09493 AC139887.4-201ENST00000607877 719 ntBASIC18.76■□□□□ 0.59
TPM1P09493 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM1P09493 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TPM1P09493 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TPM1P09493 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TPM1P09493 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.76■□□□□ 0.59
TPM1P09493 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TPM1P09493 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.76■□□□□ 0.59
TPM1P09493 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
TPM1P09493 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TPM1P09493 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.75■□□□□ 0.59
TPM1P09493 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 STK19B-204ENST00000512515 211 ntBASIC18.75■□□□□ 0.59
TPM1P09493 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.75■□□□□ 0.59
TPM1P09493 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.75■□□□□ 0.59
TPM1P09493 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.75■□□□□ 0.59
TPM1P09493 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 AL049757.1-201ENST00000616842 1596 ntBASIC18.75■□□□□ 0.59
TPM1P09493 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TPM1P09493 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TPM1P09493 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TPM1P09493 TUBB8P12-201ENST00000308911 1335 ntBASIC18.74■□□□□ 0.59
TPM1P09493 TUBB7P-202ENST00000428444 1305 ntBASIC18.74■□□□□ 0.59
TPM1P09493 TUBB8P7-204ENST00000567960 1332 ntBASIC18.74■□□□□ 0.59
TPM1P09493 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM1P09493 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM1P09493 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.74■□□□□ 0.59
TPM1P09493 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.74■□□□□ 0.59
TPM1P09493 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
TPM1P09493 AL137013.1-201ENST00000432946 1228 ntBASIC18.74■□□□□ 0.59
TPM1P09493 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
TPM1P09493 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
TPM1P09493 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM1P09493 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.74■□□□□ 0.59
TPM1P09493 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TPM1P09493 AC125634.1-201ENST00000438758 1403 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms