Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.58■□□□□ 0.4
CD48P09326 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.58■□□□□ 0.4
CD48P09326 FAM197Y8-203ENST00000450145 560 ntBASIC17.58■□□□□ 0.4
CD48P09326 AC087163.2-201ENST00000457299 853 ntBASIC17.58■□□□□ 0.4
CD48P09326 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.58■□□□□ 0.4
CD48P09326 OR7E14P-202ENST00000530490 1290 ntBASIC17.58■□□□□ 0.4
CD48P09326 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.58■□□□□ 0.4
CD48P09326 AC012640.2-201ENST00000561606 901 ntBASIC17.58■□□□□ 0.4
CD48P09326 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.58■□□□□ 0.4
CD48P09326 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 RN7SL510P-201ENST00000581311 263 ntBASIC17.58■□□□□ 0.4
CD48P09326 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.58■□□□□ 0.4
CD48P09326 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.58■□□□□ 0.4
CD48P09326 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.58■□□□□ 0.4
CD48P09326 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CD48P09326 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.58■□□□□ 0.4
CD48P09326 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
CD48P09326 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CD48P09326 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.57■□□□□ 0.4
CD48P09326 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 AC002310.6-201ENST00000624451 1377 ntBASIC17.57■□□□□ 0.4
CD48P09326 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.57■□□□□ 0.4
CD48P09326 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
CD48P09326 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.57■□□□□ 0.4
CD48P09326 AC018712.1-201ENST00000455767 687 ntBASIC17.57■□□□□ 0.4
CD48P09326 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 SLC25A6P2-201ENST00000497974 877 ntBASIC17.57■□□□□ 0.4
CD48P09326 AC073648.2-201ENST00000510116 352 ntBASIC17.57■□□□□ 0.4
CD48P09326 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CD48P09326 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CD48P09326 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CD48P09326 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.57■□□□□ 0.4
CD48P09326 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.57■□□□□ 0.4
CD48P09326 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD48P09326 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
CD48P09326 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
CD48P09326 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CD48P09326 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CD48P09326 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.56■□□□□ 0.4
CD48P09326 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.56■□□□□ 0.4
CD48P09326 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
CD48P09326 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.56■□□□□ 0.4
CD48P09326 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.56■□□□□ 0.4
CD48P09326 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.56■□□□□ 0.4
CD48P09326 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.56■□□□□ 0.4
CD48P09326 AC006557.2-201ENST00000592985 1240 ntBASIC17.56■□□□□ 0.4
CD48P09326 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.56■□□□□ 0.4
CD48P09326 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
CD48P09326 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.56■□□□□ 0.4
CD48P09326 AL805961.1-202ENST00000641562 540 ntBASIC17.56■□□□□ 0.4
CD48P09326 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD48P09326 LINC00895-201ENST00000629028 1637 ntBASIC17.56■□□□□ 0.4
CD48P09326 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.56■□□□□ 0.4
CD48P09326 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CD48P09326 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms