Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
GAPDHP04406 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.27□□□□□ -0.13
GAPDHP04406 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
GAPDHP04406 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.26□□□□□ -0.13
GAPDHP04406 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
GAPDHP04406 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.26□□□□□ -0.13
GAPDHP04406 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.26□□□□□ -0.13
GAPDHP04406 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.26□□□□□ -0.13
GAPDHP04406 AC096582.2-201ENST00000510860 516 ntBASIC14.26□□□□□ -0.13
GAPDHP04406 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.26□□□□□ -0.13
GAPDHP04406 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.26□□□□□ -0.13
GAPDHP04406 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
GAPDHP04406 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
GAPDHP04406 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
GAPDHP04406 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.25□□□□□ -0.13
GAPDHP04406 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.25□□□□□ -0.13
GAPDHP04406 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GAPDHP04406 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
GAPDHP04406 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GAPDHP04406 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
GAPDHP04406 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.25□□□□□ -0.13
GAPDHP04406 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.25□□□□□ -0.13
GAPDHP04406 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GAPDHP04406 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.25□□□□□ -0.13
GAPDHP04406 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.25□□□□□ -0.13
GAPDHP04406 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.25□□□□□ -0.13
GAPDHP04406 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.25□□□□□ -0.13
GAPDHP04406 AC109462.3-201ENST00000573934 613 ntBASIC14.25□□□□□ -0.13
GAPDHP04406 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.25□□□□□ -0.13
GAPDHP04406 AC099336.1-202ENST00000602961 463 ntBASIC14.25□□□□□ -0.13
GAPDHP04406 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.25□□□□□ -0.13
GAPDHP04406 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
GAPDHP04406 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
GAPDHP04406 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 AC078925.2-201ENST00000624013 1973 ntBASIC14.25□□□□□ -0.13
GAPDHP04406 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GAPDHP04406 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.25□□□□□ -0.13
GAPDHP04406 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms