Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 RN7SL837P-201ENST00000463010 287 ntBASIC18.13■□□□□ 0.49
TIMP1P01033 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 RNA5SP410-201ENST00000516285 106 ntBASIC18.13■□□□□ 0.49
TIMP1P01033 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.13■□□□□ 0.49
TIMP1P01033 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.13■□□□□ 0.49
TIMP1P01033 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.13■□□□□ 0.49
TIMP1P01033 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.13■□□□□ 0.49
TIMP1P01033 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TIMP1P01033 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.13■□□□□ 0.49
TIMP1P01033 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TIMP1P01033 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.12■□□□□ 0.49
TIMP1P01033 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.12■□□□□ 0.49
TIMP1P01033 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.12■□□□□ 0.49
TIMP1P01033 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TIMP1P01033 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.12■□□□□ 0.49
TIMP1P01033 TTTY23B-201ENST00000442790 549 ntBASIC18.12■□□□□ 0.49
TIMP1P01033 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.12■□□□□ 0.49
TIMP1P01033 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.12■□□□□ 0.49
TIMP1P01033 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.12■□□□□ 0.49
TIMP1P01033 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.12■□□□□ 0.49
TIMP1P01033 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.12■□□□□ 0.49
TIMP1P01033 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.12■□□□□ 0.49
TIMP1P01033 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.12■□□□□ 0.49
TIMP1P01033 AC093503.3-201ENST00000624917 2352 ntBASIC18.12■□□□□ 0.49
TIMP1P01033 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 AC133963.1-201ENST00000504166 1679 ntBASIC18.12■□□□□ 0.49
TIMP1P01033 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TIMP1P01033 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.12■□□□□ 0.49
TIMP1P01033 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.11■□□□□ 0.49
TIMP1P01033 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TIMP1P01033 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TIMP1P01033 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.11■□□□□ 0.49
TIMP1P01033 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
TIMP1P01033 AL512361.1-201ENST00000554200 418 ntBASIC18.11■□□□□ 0.49
TIMP1P01033 AC044860.1-202ENST00000559481 777 ntBASIC18.11■□□□□ 0.49
TIMP1P01033 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.11■□□□□ 0.49
TIMP1P01033 AL512343.1-201ENST00000605837 169 ntBASIC18.11■□□□□ 0.49
TIMP1P01033 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.11■□□□□ 0.49
TIMP1P01033 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TIMP1P01033 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.11■□□□□ 0.49
TIMP1P01033 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.11■□□□□ 0.49
TIMP1P01033 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
TIMP1P01033 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.11■□□□□ 0.49
TIMP1P01033 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.11■□□□□ 0.49
TIMP1P01033 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TIMP1P01033 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TIMP1P01033 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TIMP1P01033 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
TIMP1P01033 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TIMP1P01033 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.1■□□□□ 0.49
TIMP1P01033 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.1■□□□□ 0.49
TIMP1P01033 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TIMP1P01033 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TIMP1P01033 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.1■□□□□ 0.49
TIMP1P01033 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.1■□□□□ 0.49
TIMP1P01033 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TIMP1P01033 AC114501.2-201ENST00000439631 535 ntBASIC18.1■□□□□ 0.49
TIMP1P01033 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms