Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MT-CO1P00395 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
MT-CO1P00395 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
MT-CO1P00395 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MT-CO1P00395 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
MT-CO1P00395 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.41■□□□□ 0.38
MT-CO1P00395 SLC25A6P2-201ENST00000497974 877 ntBASIC17.41■□□□□ 0.38
MT-CO1P00395 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.41■□□□□ 0.38
MT-CO1P00395 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.41■□□□□ 0.38
MT-CO1P00395 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.41■□□□□ 0.38
MT-CO1P00395 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.41■□□□□ 0.38
MT-CO1P00395 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.41■□□□□ 0.38
MT-CO1P00395 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.41■□□□□ 0.38
MT-CO1P00395 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 AD000864.1-201ENST00000624076 2295 ntBASIC17.41■□□□□ 0.38
MT-CO1P00395 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 AP001094.4-201ENST00000579008 2176 ntBASIC17.4■□□□□ 0.38
MT-CO1P00395 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-CO1P00395 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MT-CO1P00395 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 AC087163.2-201ENST00000457299 853 ntBASIC17.4■□□□□ 0.38
MT-CO1P00395 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 AC092865.6-201ENST00000642101 219 ntBASIC17.4■□□□□ 0.38
MT-CO1P00395 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
MT-CO1P00395 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
MT-CO1P00395 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-CO1P00395 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
MT-CO1P00395 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.4■□□□□ 0.38
MT-CO1P00395 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.4■□□□□ 0.38
MT-CO1P00395 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MT-CO1P00395 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
MT-CO1P00395 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
MT-CO1P00395 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
MT-CO1P00395 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
MT-CO1P00395 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-CO1P00395 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-CO1P00395 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.39■□□□□ 0.37
MT-CO1P00395 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.39■□□□□ 0.37
MT-CO1P00395 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-CO1P00395 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.39■□□□□ 0.37
MT-CO1P00395 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
MT-CO1P00395 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MT-CO1P00395 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
MT-CO1P00395 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.39■□□□□ 0.37
MT-CO1P00395 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
MT-CO1P00395 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-CO1P00395 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-CO1P00395 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
MT-CO1P00395 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MT-CO1P00395 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
MT-CO1P00395 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-CO1P00395 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
MT-CO1P00395 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-CO1P00395 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.38■□□□□ 0.37
MT-CO1P00395 AC010507.1-201ENST00000633895 436 ntBASIC17.38■□□□□ 0.37
MT-CO1P00395 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.38■□□□□ 0.37
MT-CO1P00395 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MT-CO1P00395 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.38■□□□□ 0.37
MT-CO1P00395 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MT-CO1P00395 AC002310.6-201ENST00000624451 1377 ntBASIC17.38■□□□□ 0.37
MT-CO1P00395 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms