Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MIR3687-2-201ENST00000577708 61 ntBASIC17.75■□□□□ 0.43
BEST1O76090 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
BEST1O76090 MIR3687-1-201ENST00000614492 61 ntBASIC17.75■□□□□ 0.43
BEST1O76090 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
BEST1O76090 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST1O76090 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BEST1O76090 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST1O76090 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.75■□□□□ 0.43
BEST1O76090 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
BEST1O76090 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 RNF216P1-203ENST00000404404 2427 ntBASIC17.74■□□□□ 0.43
BEST1O76090 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST1O76090 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
BEST1O76090 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BEST1O76090 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BEST1O76090 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
BEST1O76090 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 HCG4-201ENST00000418983 998 ntBASIC17.74■□□□□ 0.43
BEST1O76090 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST1O76090 AC140658.5-201ENST00000438532 169 ntBASIC17.74■□□□□ 0.43
BEST1O76090 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 YBX1P5-201ENST00000509441 847 ntBASIC17.74■□□□□ 0.43
BEST1O76090 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.74■□□□□ 0.43
BEST1O76090 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.74■□□□□ 0.43
BEST1O76090 AC087641.1-201ENST00000557561 1021 ntBASIC17.74■□□□□ 0.43
BEST1O76090 MIR4469-201ENST00000583919 79 ntBASIC17.74■□□□□ 0.43
BEST1O76090 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.74■□□□□ 0.43
BEST1O76090 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST1O76090 AC092902.6-201ENST00000641783 218 ntBASIC17.74■□□□□ 0.43
BEST1O76090 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.74■□□□□ 0.43
BEST1O76090 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
BEST1O76090 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.74■□□□□ 0.43
BEST1O76090 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
BEST1O76090 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.74■□□□□ 0.43
BEST1O76090 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
BEST1O76090 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BEST1O76090 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
BEST1O76090 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST1O76090 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 AC006277.1-201ENST00000624348 1610 ntBASIC17.73■□□□□ 0.43
BEST1O76090 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
BEST1O76090 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BEST1O76090 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BEST1O76090 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
BEST1O76090 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST1O76090 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST1O76090 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST1O76090 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST1O76090 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.73■□□□□ 0.43
BEST1O76090 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST1O76090 CYP2A7P1-201ENST00000595391 815 ntBASIC17.73■□□□□ 0.43
BEST1O76090 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
BEST1O76090 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.73■□□□□ 0.43
BEST1O76090 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST1O76090 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
BEST1O76090 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
BEST1O76090 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
BEST1O76090 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.73■□□□□ 0.43
BEST1O76090 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms