Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 NUS1P2-201ENST00000417358 873 ntBASIC15.31■□□□□ 0.04
PTP4A3O75365 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.31■□□□□ 0.04
PTP4A3O75365 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.31■□□□□ 0.04
PTP4A3O75365 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.31■□□□□ 0.04
PTP4A3O75365 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 AC064862.7-201ENST00000604520 867 ntBASIC15.31■□□□□ 0.04
PTP4A3O75365 AC013467.2-201ENST00000605472 835 ntBASIC15.31■□□□□ 0.04
PTP4A3O75365 AP001269.4-201ENST00000609611 512 ntBASIC15.31■□□□□ 0.04
PTP4A3O75365 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTP4A3O75365 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.31■□□□□ 0.04
PTP4A3O75365 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.31■□□□□ 0.04
PTP4A3O75365 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PTP4A3O75365 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTP4A3O75365 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTP4A3O75365 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PTP4A3O75365 AC106795.1-205ENST00000512851 1056 ntBASIC15.3■□□□□ 0.04
PTP4A3O75365 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.3■□□□□ 0.04
PTP4A3O75365 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PTP4A3O75365 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.3■□□□□ 0.04
PTP4A3O75365 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 AC006277.1-201ENST00000624348 1610 ntBASIC15.3■□□□□ 0.04
PTP4A3O75365 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PTP4A3O75365 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PTP4A3O75365 LINC00554-201ENST00000564841 3011 ntBASIC15.3■□□□□ 0.04
PTP4A3O75365 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.29■□□□□ 0.04
PTP4A3O75365 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.29■□□□□ 0.04
PTP4A3O75365 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.29■□□□□ 0.04
PTP4A3O75365 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PTP4A3O75365 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.29■□□□□ 0.04
PTP4A3O75365 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PTP4A3O75365 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.29■□□□□ 0.04
PTP4A3O75365 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.29■□□□□ 0.04
PTP4A3O75365 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.29■□□□□ 0.04
PTP4A3O75365 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.29■□□□□ 0.04
PTP4A3O75365 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.29■□□□□ 0.04
PTP4A3O75365 AC091076.1-201ENST00000610741 619 ntBASIC15.29■□□□□ 0.04
PTP4A3O75365 AL139011.1-202ENST00000642063 584 ntBASIC15.29■□□□□ 0.04
PTP4A3O75365 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.29■□□□□ 0.04
PTP4A3O75365 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
PTP4A3O75365 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PTP4A3O75365 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PTP4A3O75365 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms