Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.9■□□□□ 0.14
CTNSO60931 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
CTNSO60931 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CTNSO60931 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.9■□□□□ 0.14
CTNSO60931 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CTNSO60931 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.9■□□□□ 0.14
CTNSO60931 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.9■□□□□ 0.14
CTNSO60931 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.9■□□□□ 0.14
CTNSO60931 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CTNSO60931 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.9■□□□□ 0.14
CTNSO60931 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.9■□□□□ 0.14
CTNSO60931 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CTNSO60931 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.89■□□□□ 0.13
CTNSO60931 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 MED15P5-201ENST00000423150 992 ntBASIC15.89■□□□□ 0.13
CTNSO60931 KRT18P3-201ENST00000451602 1288 ntBASIC15.89■□□□□ 0.13
CTNSO60931 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.89■□□□□ 0.13
CTNSO60931 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 RNA5SP416-201ENST00000516838 111 ntBASIC15.89■□□□□ 0.13
CTNSO60931 AP002490.2-201ENST00000524791 560 ntBASIC15.89■□□□□ 0.13
CTNSO60931 KRT18P58-201ENST00000527480 1120 ntBASIC15.89■□□□□ 0.13
CTNSO60931 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 AC005412.3-201ENST00000580309 715 ntBASIC15.89■□□□□ 0.13
CTNSO60931 AC140113.2-201ENST00000604370 208 ntBASIC15.89■□□□□ 0.13
CTNSO60931 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 AL353732.1-201ENST00000569618 1459 ntBASIC15.89■□□□□ 0.13
CTNSO60931 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CTNSO60931 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNSO60931 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNSO60931 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.88■□□□□ 0.13
CTNSO60931 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CTNSO60931 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CTNSO60931 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNSO60931 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CTNSO60931 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CTNSO60931 PMS2P1-201ENST00000431037 1228 ntBASIC15.88■□□□□ 0.13
CTNSO60931 AP000347.1-202ENST00000435868 847 ntBASIC15.88■□□□□ 0.13
CTNSO60931 RHOQP3-201ENST00000437982 621 ntBASIC15.88■□□□□ 0.13
CTNSO60931 KRT18P2-201ENST00000447938 1258 ntBASIC15.88■□□□□ 0.13
CTNSO60931 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CTNSO60931 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.88■□□□□ 0.13
CTNSO60931 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNSO60931 AC091167.2-201ENST00000579581 588 ntBASIC15.88■□□□□ 0.13
CTNSO60931 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.88■□□□□ 0.13
CTNSO60931 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNSO60931 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNSO60931 ACTL9-202ENST00000612068 1252 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms