Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 AC107918.2-201ENST00000530817 355 ntBASIC16.32■□□□□ 0.2
PRAMEF4O60810 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 AL160237.2-201ENST00000556165 472 ntBASIC16.32■□□□□ 0.2
PRAMEF4O60810 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 AC105339.3-201ENST00000560043 636 ntBASIC16.32■□□□□ 0.2
PRAMEF4O60810 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 MIR7706-201ENST00000613747 67 ntBASIC16.32■□□□□ 0.2
PRAMEF4O60810 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRAMEF4O60810 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.32■□□□□ 0.2
PRAMEF4O60810 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 AC006277.1-201ENST00000624348 1610 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 FAAHP1-202ENST00000446499 1238 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 AF186996.4-201ENST00000467186 377 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 IGHV3-65-201ENST00000523210 341 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 OR7E47P-204ENST00000575924 449 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 AL356488.2-201ENST00000602755 427 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 AC008667.4-201ENST00000607370 168 ntBASIC16.31■□□□□ 0.2
PRAMEF4O60810 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PRAMEF4O60810 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PRAMEF4O60810 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 AC079328.2-201ENST00000561241 3354 ntBASIC16.3■□□□□ 0.2
PRAMEF4O60810 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 AC009078.2-202ENST00000463353 338 ntBASIC16.3■□□□□ 0.2
PRAMEF4O60810 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 MIR4492-201ENST00000581627 80 ntBASIC16.3■□□□□ 0.2
PRAMEF4O60810 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 AC013467.2-201ENST00000605472 835 ntBASIC16.3■□□□□ 0.2
PRAMEF4O60810 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PRAMEF4O60810 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PRAMEF4O60810 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms