Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CTNND1O60716 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CTNND1O60716 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
CTNND1O60716 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTNND1O60716 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNND1O60716 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNND1O60716 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTNND1O60716 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CTNND1O60716 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.74■□□□□ 0.75
CTNND1O60716 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTNND1O60716 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 AC016027.1-202ENST00000607927 1699 ntBASIC19.73■□□□□ 0.75
CTNND1O60716 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNND1O60716 TERF1P3-201ENST00000505638 1227 ntBASIC19.73■□□□□ 0.75
CTNND1O60716 AC097493.3-201ENST00000509725 367 ntBASIC19.73■□□□□ 0.75
CTNND1O60716 AC069120.2-201ENST00000524091 540 ntBASIC19.73■□□□□ 0.75
CTNND1O60716 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.73■□□□□ 0.75
CTNND1O60716 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNND1O60716 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CTNND1O60716 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.73■□□□□ 0.75
CTNND1O60716 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTNND1O60716 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CTNND1O60716 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.73■□□□□ 0.75
CTNND1O60716 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNND1O60716 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNND1O60716 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CTNND1O60716 GNAS-203ENST00000306120 1878 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CTNND1O60716 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 MIR661-201ENST00000384842 89 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.72■□□□□ 0.75
CTNND1O60716 FAM207CP-201ENST00000443486 507 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 UGT1A2P-201ENST00000454886 866 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.72■□□□□ 0.75
CTNND1O60716 IGHV3-42-201ENST00000520410 361 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.72■□□□□ 0.75
CTNND1O60716 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.72■□□□□ 0.75
CTNND1O60716 AL390754.1-201ENST00000619088 582 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTNND1O60716 AF228730.6-201ENST00000641497 218 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 AC084121.3-201ENST00000641716 218 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 AC105233.6-201ENST00000642093 218 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.72■□□□□ 0.75
CTNND1O60716 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 HCG11-201ENST00000411553 5696 ntBASIC19.72■□□□□ 0.75
CTNND1O60716 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CTNND1O60716 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTNND1O60716 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 KRT8P49-201ENST00000604166 1432 ntBASIC19.71■□□□□ 0.75
CTNND1O60716 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNND1O60716 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CTNND1O60716 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTNND1O60716 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNND1O60716 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNND1O60716 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNND1O60716 AC015922.1-201ENST00000421102 1152 ntBASIC19.71■□□□□ 0.75
CTNND1O60716 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNND1O60716 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CTNND1O60716 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CTNND1O60716 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNND1O60716 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNND1O60716 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.71■□□□□ 0.75
CTNND1O60716 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.71■□□□□ 0.75
CTNND1O60716 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNND1O60716 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTNND1O60716 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.71■□□□□ 0.75
CTNND1O60716 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTNND1O60716 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CTNND1O60716 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms