Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.29■□□□□ 0.2
GFRA3O60609 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.29■□□□□ 0.2
GFRA3O60609 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.29■□□□□ 0.2
GFRA3O60609 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.29■□□□□ 0.2
GFRA3O60609 AL662890.1-201ENST00000396818 632 ntBASIC16.29■□□□□ 0.2
GFRA3O60609 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.29■□□□□ 0.2
GFRA3O60609 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 TMEM198B-204ENST00000484016 896 ntBASIC16.29■□□□□ 0.2
GFRA3O60609 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.29■□□□□ 0.2
GFRA3O60609 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.29■□□□□ 0.2
GFRA3O60609 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.29■□□□□ 0.2
GFRA3O60609 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
GFRA3O60609 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
GFRA3O60609 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
GFRA3O60609 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.28■□□□□ 0.2
GFRA3O60609 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA3O60609 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA3O60609 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
GFRA3O60609 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA3O60609 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
GFRA3O60609 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.28■□□□□ 0.2
GFRA3O60609 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA3O60609 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.28■□□□□ 0.2
GFRA3O60609 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA3O60609 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.28■□□□□ 0.2
GFRA3O60609 ACTG1P17-201ENST00000558391 1119 ntBASIC16.28■□□□□ 0.2
GFRA3O60609 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.28■□□□□ 0.2
GFRA3O60609 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 RPSAP52-203ENST00000622976 1023 ntBASIC16.28■□□□□ 0.2
GFRA3O60609 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.28■□□□□ 0.2
GFRA3O60609 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.28■□□□□ 0.2
GFRA3O60609 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
GFRA3O60609 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.27■□□□□ 0.2
GFRA3O60609 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GFRA3O60609 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.27■□□□□ 0.2
GFRA3O60609 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
GFRA3O60609 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.27■□□□□ 0.2
GFRA3O60609 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
GFRA3O60609 AC104306.2-201ENST00000451877 341 ntBASIC16.27■□□□□ 0.2
GFRA3O60609 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.27■□□□□ 0.2
GFRA3O60609 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.27■□□□□ 0.2
GFRA3O60609 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.27■□□□□ 0.2
GFRA3O60609 PRYP6-201ENST00000514804 343 ntBASIC16.27■□□□□ 0.2
GFRA3O60609 MTND2P7-201ENST00000521337 640 ntBASIC16.27■□□□□ 0.2
GFRA3O60609 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
GFRA3O60609 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.27■□□□□ 0.2
GFRA3O60609 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.27■□□□□ 0.2
GFRA3O60609 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.27■□□□□ 0.2
GFRA3O60609 AC244452.3-201ENST00000636814 210 ntBASIC16.27■□□□□ 0.2
GFRA3O60609 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms