Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.42■□□□□ 0.38
CACNG3O60359 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 AC002056.1-201ENST00000395613 760 ntBASIC17.42■□□□□ 0.38
CACNG3O60359 ADH5P3-201ENST00000433842 1137 ntBASIC17.42■□□□□ 0.38
CACNG3O60359 AC140658.5-201ENST00000438532 169 ntBASIC17.42■□□□□ 0.38
CACNG3O60359 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.42■□□□□ 0.38
CACNG3O60359 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNG3O60359 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNG3O60359 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.42■□□□□ 0.38
CACNG3O60359 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.42■□□□□ 0.38
CACNG3O60359 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNG3O60359 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.42■□□□□ 0.38
CACNG3O60359 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CACNG3O60359 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.42■□□□□ 0.38
CACNG3O60359 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CACNG3O60359 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CACNG3O60359 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CACNG3O60359 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CACNG3O60359 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNG3O60359 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.41■□□□□ 0.38
CACNG3O60359 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.41■□□□□ 0.38
CACNG3O60359 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNG3O60359 AC005412.3-201ENST00000580309 715 ntBASIC17.41■□□□□ 0.38
CACNG3O60359 MIR4515-201ENST00000584082 81 ntBASIC17.41■□□□□ 0.38
CACNG3O60359 AL355385.1-201ENST00000606123 409 ntBASIC17.41■□□□□ 0.38
CACNG3O60359 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNG3O60359 AC105339.1-204ENST00000636249 355 ntBASIC17.41■□□□□ 0.38
CACNG3O60359 NKILA-202ENST00000614771 2598 ntBASIC17.41■□□□□ 0.38
CACNG3O60359 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CACNG3O60359 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CACNG3O60359 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNG3O60359 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNG3O60359 AGGF1P2-201ENST00000426656 2106 ntBASIC17.41■□□□□ 0.38
CACNG3O60359 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CACNG3O60359 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CACNG3O60359 AC106886.4-201ENST00000623557 2502 ntBASIC17.41■□□□□ 0.38
CACNG3O60359 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNG3O60359 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
CACNG3O60359 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CACNG3O60359 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
CACNG3O60359 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNG3O60359 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNG3O60359 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNG3O60359 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNG3O60359 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CACNG3O60359 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.4■□□□□ 0.38
CACNG3O60359 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNG3O60359 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.4■□□□□ 0.38
CACNG3O60359 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNG3O60359 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.4■□□□□ 0.38
CACNG3O60359 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNG3O60359 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNG3O60359 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNG3O60359 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms