Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 AC078925.2-201ENST00000624013 1973 ntBASIC16.62■□□□□ 0.25
PEX1O43933 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PEX1O43933 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PEX1O43933 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PEX1O43933 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.62■□□□□ 0.25
PEX1O43933 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.62■□□□□ 0.25
PEX1O43933 AC074051.2-201ENST00000565115 352 ntBASIC16.62■□□□□ 0.25
PEX1O43933 AC111152.3-201ENST00000569699 673 ntBASIC16.62■□□□□ 0.25
PEX1O43933 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 Z69720.1-201ENST00000601483 472 ntBASIC16.62■□□□□ 0.25
PEX1O43933 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.62■□□□□ 0.25
PEX1O43933 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PEX1O43933 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PEX1O43933 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 AC132938.6-201ENST00000623828 1655 ntBASIC16.62■□□□□ 0.25
PEX1O43933 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PEX1O43933 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.62■□□□□ 0.25
PEX1O43933 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.62■□□□□ 0.25
PEX1O43933 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.61■□□□□ 0.25
PEX1O43933 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.61■□□□□ 0.25
PEX1O43933 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PEX1O43933 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.61■□□□□ 0.25
PEX1O43933 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.61■□□□□ 0.25
PEX1O43933 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PEX1O43933 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.61■□□□□ 0.25
PEX1O43933 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.61■□□□□ 0.25
PEX1O43933 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 VENTXP7-201ENST00000475503 772 ntBASIC16.61■□□□□ 0.25
PEX1O43933 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.61■□□□□ 0.25
PEX1O43933 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.61■□□□□ 0.25
PEX1O43933 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 AC011840.4-201ENST00000578471 627 ntBASIC16.61■□□□□ 0.25
PEX1O43933 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.61■□□□□ 0.25
PEX1O43933 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.61■□□□□ 0.25
PEX1O43933 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PEX1O43933 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.61■□□□□ 0.25
PEX1O43933 AL121772.3-201ENST00000610840 674 ntBASIC16.61■□□□□ 0.25
PEX1O43933 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.61■□□□□ 0.25
PEX1O43933 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.61■□□□□ 0.25
PEX1O43933 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.61■□□□□ 0.25
PEX1O43933 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PEX1O43933 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PEX1O43933 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 LINC00167-201ENST00000530583 1419 ntBASIC16.61■□□□□ 0.25
PEX1O43933 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PEX1O43933 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.6■□□□□ 0.25
PEX1O43933 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PEX1O43933 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms