Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 BCAR1-209ENST00000546196 1340 ntBASIC16.26■□□□□ 0.19
PRICKLE3O43900 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 AC023141.13-201ENST00000604991 943 ntBASIC16.26■□□□□ 0.19
PRICKLE3O43900 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 AC007064.4-201ENST00000637740 555 ntBASIC16.26■□□□□ 0.19
PRICKLE3O43900 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 LINC00895-201ENST00000629028 1637 ntBASIC16.26■□□□□ 0.19
PRICKLE3O43900 AC105020.1-201ENST00000435356 2205 ntBASIC16.26■□□□□ 0.19
PRICKLE3O43900 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PRICKLE3O43900 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
PRICKLE3O43900 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AC131009.4-201ENST00000624048 1740 ntBASIC16.25■□□□□ 0.19
PRICKLE3O43900 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 HMGA1P7-201ENST00000406908 502 ntBASIC16.25■□□□□ 0.19
PRICKLE3O43900 AC023274.1-201ENST00000418278 595 ntBASIC16.25■□□□□ 0.19
PRICKLE3O43900 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AC004832.2-201ENST00000426397 482 ntBASIC16.25■□□□□ 0.19
PRICKLE3O43900 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 PDPK2P-202ENST00000562415 1191 ntBASIC16.25■□□□□ 0.19
PRICKLE3O43900 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AL645728.2-201ENST00000641974 660 ntBASIC16.25■□□□□ 0.19
PRICKLE3O43900 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 AL645728.1-201ENST00000366221 2101 ntBASIC16.25■□□□□ 0.19
PRICKLE3O43900 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PRICKLE3O43900 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PRICKLE3O43900 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 AC022211.2-201ENST00000585075 2527 ntBASIC16.24■□□□□ 0.19
PRICKLE3O43900 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 AC006277.1-201ENST00000624348 1610 ntBASIC16.24■□□□□ 0.19
PRICKLE3O43900 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 HCG4-201ENST00000418983 998 ntBASIC16.24■□□□□ 0.19
PRICKLE3O43900 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 AC005915.1-201ENST00000624912 2018 ntBASIC16.24■□□□□ 0.19
PRICKLE3O43900 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PRICKLE3O43900 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PRICKLE3O43900 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PRICKLE3O43900 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PRICKLE3O43900 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms