Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNAI2O43623 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
SNAI2O43623 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
SNAI2O43623 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNAI2O43623 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNAI2O43623 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNAI2O43623 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
SNAI2O43623 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.77□□□□□ -0.37
SNAI2O43623 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SNAI2O43623 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 AC096633.1-201ENST00000422446 749 ntBASIC12.77□□□□□ -0.37
SNAI2O43623 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.77□□□□□ -0.37
SNAI2O43623 AC034232.1-201ENST00000506026 1064 ntBASIC12.77□□□□□ -0.37
SNAI2O43623 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.77□□□□□ -0.37
SNAI2O43623 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.77□□□□□ -0.37
SNAI2O43623 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC12.77□□□□□ -0.37
SNAI2O43623 AC004263.2-201ENST00000617183 678 ntBASIC12.77□□□□□ -0.37
SNAI2O43623 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
SNAI2O43623 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SNAI2O43623 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.77□□□□□ -0.37
SNAI2O43623 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.77□□□□□ -0.37
SNAI2O43623 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.77□□□□□ -0.37
SNAI2O43623 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SNAI2O43623 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SNAI2O43623 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.77□□□□□ -0.37
SNAI2O43623 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.76□□□□□ -0.37
SNAI2O43623 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.76□□□□□ -0.37
SNAI2O43623 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC12.76□□□□□ -0.37
SNAI2O43623 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SNAI2O43623 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.76□□□□□ -0.37
SNAI2O43623 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.76□□□□□ -0.37
SNAI2O43623 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 AC092053.1-201ENST00000605787 1936 ntBASIC12.76□□□□□ -0.37
SNAI2O43623 AC078925.2-201ENST00000624013 1973 ntBASIC12.76□□□□□ -0.37
SNAI2O43623 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.76□□□□□ -0.37
SNAI2O43623 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SNAI2O43623 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.76□□□□□ -0.37
SNAI2O43623 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms