Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
XRCC2O43543 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
XRCC2O43543 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.79□□□□□ -0.04
XRCC2O43543 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.79□□□□□ -0.04
XRCC2O43543 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
XRCC2O43543 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.79□□□□□ -0.04
XRCC2O43543 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.79□□□□□ -0.04
XRCC2O43543 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.79□□□□□ -0.04
XRCC2O43543 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 AC106886.4-201ENST00000623557 2502 ntBASIC14.79□□□□□ -0.04
XRCC2O43543 AL021920.2-201ENST00000624828 1351 ntBASIC14.79□□□□□ -0.04
XRCC2O43543 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
XRCC2O43543 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
XRCC2O43543 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
XRCC2O43543 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
XRCC2O43543 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.78□□□□□ -0.04
XRCC2O43543 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
XRCC2O43543 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.78□□□□□ -0.04
XRCC2O43543 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.78□□□□□ -0.04
XRCC2O43543 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 AP002414.1-201ENST00000391405 1147 ntBASIC14.78□□□□□ -0.04
XRCC2O43543 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
XRCC2O43543 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.78□□□□□ -0.04
XRCC2O43543 SAPCD2P3-201ENST00000455031 850 ntBASIC14.78□□□□□ -0.04
XRCC2O43543 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.78□□□□□ -0.04
XRCC2O43543 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.78□□□□□ -0.04
XRCC2O43543 AC139887.3-201ENST00000568585 713 ntBASIC14.78□□□□□ -0.04
XRCC2O43543 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.78□□□□□ -0.04
XRCC2O43543 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
XRCC2O43543 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.78□□□□□ -0.04
XRCC2O43543 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
XRCC2O43543 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
XRCC2O43543 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.78□□□□□ -0.04
XRCC2O43543 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
XRCC2O43543 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.78□□□□□ -0.04
XRCC2O43543 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.77□□□□□ -0.04
XRCC2O43543 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
XRCC2O43543 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.77□□□□□ -0.04
XRCC2O43543 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
XRCC2O43543 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
XRCC2O43543 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.77□□□□□ -0.04
XRCC2O43543 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.77□□□□□ -0.04
XRCC2O43543 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
XRCC2O43543 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
XRCC2O43543 AL590787.1-201ENST00000568856 1315 ntBASIC14.77□□□□□ -0.04
XRCC2O43543 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
XRCC2O43543 AC046158.3-201ENST00000624947 2558 ntBASIC14.77□□□□□ -0.04
XRCC2O43543 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.77□□□□□ -0.04
XRCC2O43543 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
XRCC2O43543 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XRCC2O43543 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.77□□□□□ -0.05
XRCC2O43543 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XRCC2O43543 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
XRCC2O43543 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
XRCC2O43543 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
XRCC2O43543 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
XRCC2O43543 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.77□□□□□ -0.05
XRCC2O43543 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms