Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.46■□□□□ 0.39
COCHO43405 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.46■□□□□ 0.39
COCHO43405 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COCHO43405 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.46■□□□□ 0.39
COCHO43405 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.46■□□□□ 0.39
COCHO43405 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.46■□□□□ 0.39
COCHO43405 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.46■□□□□ 0.39
COCHO43405 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
COCHO43405 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COCHO43405 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.46■□□□□ 0.39
COCHO43405 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.46■□□□□ 0.39
COCHO43405 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.46■□□□□ 0.39
COCHO43405 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.46■□□□□ 0.39
COCHO43405 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.46■□□□□ 0.39
COCHO43405 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.46■□□□□ 0.39
COCHO43405 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.46■□□□□ 0.39
COCHO43405 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COCHO43405 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.46■□□□□ 0.39
COCHO43405 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.46■□□□□ 0.38
COCHO43405 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
COCHO43405 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COCHO43405 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.45■□□□□ 0.38
COCHO43405 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.45■□□□□ 0.38
COCHO43405 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.45■□□□□ 0.38
COCHO43405 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
COCHO43405 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COCHO43405 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.45■□□□□ 0.38
COCHO43405 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.45■□□□□ 0.38
COCHO43405 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 PMS2P4-201ENST00000412466 1052 ntBASIC17.45■□□□□ 0.38
COCHO43405 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COCHO43405 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.45■□□□□ 0.38
COCHO43405 AC023141.5-201ENST00000458585 616 ntBASIC17.45■□□□□ 0.38
COCHO43405 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.45■□□□□ 0.38
COCHO43405 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.45■□□□□ 0.38
COCHO43405 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
COCHO43405 MIR3909-201ENST00000579518 119 ntBASIC17.45■□□□□ 0.38
COCHO43405 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.45■□□□□ 0.38
COCHO43405 AC093028.1-201ENST00000622998 982 ntBASIC17.45■□□□□ 0.38
COCHO43405 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.45■□□□□ 0.38
COCHO43405 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COCHO43405 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
COCHO43405 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
COCHO43405 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COCHO43405 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
COCHO43405 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COCHO43405 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 AC005332.8-201ENST00000622750 2735 ntBASIC17.44■□□□□ 0.38
COCHO43405 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.44■□□□□ 0.38
COCHO43405 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.44■□□□□ 0.38
COCHO43405 AL627223.1-201ENST00000416693 442 ntBASIC17.44■□□□□ 0.38
COCHO43405 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.44■□□□□ 0.38
COCHO43405 AL592309.1-201ENST00000443127 649 ntBASIC17.44■□□□□ 0.38
COCHO43405 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.44■□□□□ 0.38
COCHO43405 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.44■□□□□ 0.38
COCHO43405 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.44■□□□□ 0.38
COCHO43405 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.44■□□□□ 0.38
COCHO43405 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
COCHO43405 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
COCHO43405 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
COCHO43405 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COCHO43405 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COCHO43405 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
COCHO43405 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms