Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ATP2A1O14983 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ATP2A1O14983 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2A1O14983 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATP2A1O14983 KRT18P32-201ENST00000424695 1287 ntBASIC19.36■□□□□ 0.69
ATP2A1O14983 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2A1O14983 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ATP2A1O14983 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ATP2A1O14983 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.36■□□□□ 0.69
ATP2A1O14983 AL031055.1-201ENST00000606362 631 ntBASIC19.36■□□□□ 0.69
ATP2A1O14983 AL096865.1-201ENST00000606796 927 ntBASIC19.36■□□□□ 0.69
ATP2A1O14983 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC19.36■□□□□ 0.69
ATP2A1O14983 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.36■□□□□ 0.69
ATP2A1O14983 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATP2A1O14983 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 KRT8P49-201ENST00000604166 1432 ntBASIC19.35■□□□□ 0.69
ATP2A1O14983 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 AC131009.4-201ENST00000624048 1740 ntBASIC19.35■□□□□ 0.69
ATP2A1O14983 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.35■□□□□ 0.69
ATP2A1O14983 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.35■□□□□ 0.69
ATP2A1O14983 AC051619.7-201ENST00000568314 623 ntBASIC19.35■□□□□ 0.69
ATP2A1O14983 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.35■□□□□ 0.69
ATP2A1O14983 AC092364.2-202ENST00000597012 1073 ntBASIC19.35■□□□□ 0.69
ATP2A1O14983 Z92544.3-201ENST00000624747 417 ntBASIC19.35■□□□□ 0.69
ATP2A1O14983 AP001350.2-201ENST00000625104 1094 ntBASIC19.35■□□□□ 0.69
ATP2A1O14983 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATP2A1O14983 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.35■□□□□ 0.69
ATP2A1O14983 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.35■□□□□ 0.69
ATP2A1O14983 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2A1O14983 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 CNN2P2-201ENST00000443536 909 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 BCRP1-201ENST00000444246 691 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 CNN2P3-201ENST00000450201 906 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.34■□□□□ 0.69
ATP2A1O14983 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2A1O14983 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2A1O14983 AC069262.1-201ENST00000539058 672 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 MIR4492-201ENST00000581627 80 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 AC005498.2-205ENST00000593218 784 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 AL136317.3-201ENST00000618497 906 ntBASIC19.34■□□□□ 0.69
ATP2A1O14983 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ATP2A1O14983 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.34■□□□□ 0.69
ATP2A1O14983 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ATP2A1O14983 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.34■□□□□ 0.69
ATP2A1O14983 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ATP2A1O14983 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.34■□□□□ 0.69
ATP2A1O14983 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATP2A1O14983 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms