Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GGTLC5P-201ENST00000617623 998 ntBASIC16.25■□□□□ 0.19
PCDH17O14917 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
PCDH17O14917 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH17O14917 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH17O14917 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH17O14917 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
PCDH17O14917 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH17O14917 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 AP002414.3-201ENST00000589352 1468 ntBASIC16.24■□□□□ 0.19
PCDH17O14917 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH17O14917 BX842568.4-201ENST00000421222 227 ntBASIC16.24■□□□□ 0.19
PCDH17O14917 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH17O14917 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 AC034105.1-201ENST00000563488 319 ntBASIC16.24■□□□□ 0.19
PCDH17O14917 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 AL353135.1-201ENST00000606729 504 ntBASIC16.24■□□□□ 0.19
PCDH17O14917 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH17O14917 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH17O14917 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH17O14917 AC018695.7-201ENST00000624587 2492 ntBASIC16.24■□□□□ 0.19
PCDH17O14917 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH17O14917 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH17O14917 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH17O14917 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH17O14917 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PCDH17O14917 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH17O14917 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDH17O14917 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDH17O14917 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 AC016396.2-201ENST00000562575 1417 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 AP002414.1-201ENST00000391405 1147 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 MIR940-201ENST00000401276 94 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH17O14917 MED15P5-201ENST00000423150 992 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 PRSS29P-201ENST00000440800 595 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH17O14917 AC004817.3-201ENST00000602957 2129 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 AC008667.4-201ENST00000607370 168 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 AL139327.4-201ENST00000612362 153 ntBASIC16.23■□□□□ 0.19
PCDH17O14917 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDH17O14917 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH17O14917 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PCDH17O14917 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms