Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UPK2O00526 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK2O00526 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK2O00526 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UPK2O00526 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK2O00526 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK2O00526 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK2O00526 ATP5G2P1-201ENST00000433580 426 ntBASIC13.64□□□□□ -0.23
UPK2O00526 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.64□□□□□ -0.23
UPK2O00526 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.64□□□□□ -0.23
UPK2O00526 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UPK2O00526 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.64□□□□□ -0.23
UPK2O00526 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK2O00526 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK2O00526 AC092119.3-201ENST00000612618 583 ntBASIC13.64□□□□□ -0.23
UPK2O00526 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK2O00526 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.64□□□□□ -0.23
UPK2O00526 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.64□□□□□ -0.23
UPK2O00526 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
UPK2O00526 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UPK2O00526 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 AC006449.5-201ENST00000610658 2098 ntBASIC13.63□□□□□ -0.23
UPK2O00526 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK2O00526 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UPK2O00526 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.63□□□□□ -0.23
UPK2O00526 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 PRYP5-201ENST00000451909 266 ntBASIC13.63□□□□□ -0.23
UPK2O00526 KRT16P4-201ENST00000453883 522 ntBASIC13.63□□□□□ -0.23
UPK2O00526 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.63□□□□□ -0.23
UPK2O00526 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.63□□□□□ -0.23
UPK2O00526 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 AL358472.4-201ENST00000633140 710 ntBASIC13.63□□□□□ -0.23
UPK2O00526 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 LINC00895-201ENST00000629028 1637 ntBASIC13.63□□□□□ -0.23
UPK2O00526 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 AP005117.1-201ENST00000584346 1413 ntBASIC13.63□□□□□ -0.23
UPK2O00526 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UPK2O00526 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.63□□□□□ -0.23
UPK2O00526 AL590787.1-201ENST00000568856 1315 ntBASIC13.63□□□□□ -0.23
UPK2O00526 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK2O00526 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK2O00526 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK2O00526 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK2O00526 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK2O00526 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.62□□□□□ -0.23
UPK2O00526 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.62□□□□□ -0.23
UPK2O00526 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UPK2O00526 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
UPK2O00526 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms