Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.12■□□□□ 0.17
UPK1AO00322 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.12■□□□□ 0.17
UPK1AO00322 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
UPK1AO00322 AC092364.2-201ENST00000596710 2692 ntBASIC16.12■□□□□ 0.17
UPK1AO00322 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
UPK1AO00322 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
UPK1AO00322 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 PRYP5-201ENST00000451909 266 ntBASIC16.11■□□□□ 0.17
UPK1AO00322 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 BX005266.1-201ENST00000473402 457 ntBASIC16.11■□□□□ 0.17
UPK1AO00322 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 KRT18P56-201ENST00000507275 550 ntBASIC16.11■□□□□ 0.17
UPK1AO00322 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 MTDHP3-201ENST00000594186 672 ntBASIC16.11■□□□□ 0.17
UPK1AO00322 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
UPK1AO00322 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.11■□□□□ 0.17
UPK1AO00322 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
UPK1AO00322 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
UPK1AO00322 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UPK1AO00322 AC105917.1-201ENST00000506637 2539 ntBASIC16.1■□□□□ 0.17
UPK1AO00322 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
UPK1AO00322 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UPK1AO00322 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UPK1AO00322 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
UPK1AO00322 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK1AO00322 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.1■□□□□ 0.17
UPK1AO00322 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
UPK1AO00322 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.1■□□□□ 0.17
UPK1AO00322 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.1■□□□□ 0.17
UPK1AO00322 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.1■□□□□ 0.17
UPK1AO00322 NKAPP1-205ENST00000585790 367 ntBASIC16.1■□□□□ 0.17
UPK1AO00322 REXO1L6P-202ENST00000619970 1078 ntBASIC16.1■□□□□ 0.17
UPK1AO00322 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.1■□□□□ 0.17
UPK1AO00322 AL355877.3-201ENST00000622820 899 ntBASIC16.1■□□□□ 0.17
UPK1AO00322 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
UPK1AO00322 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
UPK1AO00322 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
UPK1AO00322 AL356309.3-201ENST00000624132 1934 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms