Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.17■□□□□ 0.34
AP3B1O00203 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3B1O00203 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.17■□□□□ 0.34
AP3B1O00203 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
AP3B1O00203 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.17■□□□□ 0.34
AP3B1O00203 AC064862.7-201ENST00000604520 867 ntBASIC17.17■□□□□ 0.34
AP3B1O00203 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP3B1O00203 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.17■□□□□ 0.34
AP3B1O00203 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3B1O00203 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3B1O00203 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
AP3B1O00203 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3B1O00203 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3B1O00203 AL645728.1-201ENST00000366221 2101 ntBASIC17.17■□□□□ 0.34
AP3B1O00203 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
AP3B1O00203 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
AP3B1O00203 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.16■□□□□ 0.34
AP3B1O00203 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.16■□□□□ 0.34
AP3B1O00203 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.16■□□□□ 0.34
AP3B1O00203 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
AP3B1O00203 PRELID1P1-202ENST00000567272 903 ntBASIC17.16■□□□□ 0.34
AP3B1O00203 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 AL732292.2-201ENST00000609649 430 ntBASIC17.16■□□□□ 0.34
AP3B1O00203 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.16■□□□□ 0.34
AP3B1O00203 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3B1O00203 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3B1O00203 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3B1O00203 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
AP3B1O00203 TOP3BP1-201ENST00000420768 1380 ntBASIC17.15■□□□□ 0.34
AP3B1O00203 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
AP3B1O00203 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.15■□□□□ 0.34
AP3B1O00203 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.15■□□□□ 0.34
AP3B1O00203 AC008608.2-201ENST00000606089 416 ntBASIC17.15■□□□□ 0.34
AP3B1O00203 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3B1O00203 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP3B1O00203 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3B1O00203 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms