Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NACAE9PAV3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
NACAE9PAV3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
NACAE9PAV3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC12.48□□□□□ -0.41
NACAE9PAV3 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NACAE9PAV3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.48□□□□□ -0.41
NACAE9PAV3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NACAE9PAV3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.48□□□□□ -0.41
NACAE9PAV3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
NACAE9PAV3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 LINC02199-201ENST00000506655 2702 ntBASIC12.48□□□□□ -0.41
NACAE9PAV3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.48□□□□□ -0.41
NACAE9PAV3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NACAE9PAV3 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 KRT16P4-201ENST00000453883 522 ntBASIC12.48□□□□□ -0.41
NACAE9PAV3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.48□□□□□ -0.41
NACAE9PAV3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
NACAE9PAV3 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC12.48□□□□□ -0.41
NACAE9PAV3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
NACAE9PAV3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 AC104692.2-201ENST00000603054 253 ntBASIC12.48□□□□□ -0.41
NACAE9PAV3 TP73-AS1-207ENST00000624167 988 ntBASIC12.48□□□□□ -0.41
NACAE9PAV3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
NACAE9PAV3 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 AL662844.4-201ENST00000606367 2838 ntBASIC12.48□□□□□ -0.41
NACAE9PAV3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.48□□□□□ -0.41
NACAE9PAV3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.48□□□□□ -0.41
NACAE9PAV3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
NACAE9PAV3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.48□□□□□ -0.41
NACAE9PAV3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
NACAE9PAV3 AC046185.3-201ENST00000623228 1824 ntBASIC12.47□□□□□ -0.41
NACAE9PAV3 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
NACAE9PAV3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.47□□□□□ -0.41
NACAE9PAV3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.47□□□□□ -0.41
NACAE9PAV3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.47□□□□□ -0.41
NACAE9PAV3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
NACAE9PAV3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
NACAE9PAV3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
NACAE9PAV3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.47□□□□□ -0.41
NACAE9PAV3 FOSL1P1-201ENST00000511041 816 ntBASIC12.47□□□□□ -0.41
NACAE9PAV3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.47□□□□□ -0.41
NACAE9PAV3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
NACAE9PAV3 AC019129.2-201ENST00000609837 1235 ntBASIC12.47□□□□□ -0.41
NACAE9PAV3 REXO1L6P-202ENST00000619970 1078 ntBASIC12.47□□□□□ -0.41
NACAE9PAV3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
NACAE9PAV3 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
NACAE9PAV3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
NACAE9PAV3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NACAE9PAV3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NACAE9PAV3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.46□□□□□ -0.41
NACAE9PAV3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
NACAE9PAV3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms