Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 CRYGEP-201ENST00000412192 528 ntBASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 KLF4P1-201ENST00000412782 1185 ntBASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 SIGLEC30P-201ENST00000455569 941 ntBASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 AC134684.3-201ENST00000641758 218 ntBASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 NCF1C-201ENST00000438382 1427 ntBASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 AL353593.2-201ENST00000602529 1483 ntBASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TUBAL3A6NHL2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AC211486.1-202ENST00000416371 468 ntBASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AC211476.1-201ENST00000503899 468 ntBASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AC004706.3-202ENST00000621574 984 ntBASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TUBAL3A6NHL2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TUBAL3A6NHL2 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms