Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM235A6NFC5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 SLC25A3P1-201ENST00000443844 931 ntBASIC14.55□□□□□ -0.08
TMEM235A6NFC5 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 COX11P1-201ENST00000489116 835 ntBASIC14.55□□□□□ -0.08
TMEM235A6NFC5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 AP002490.2-201ENST00000524791 560 ntBASIC14.55□□□□□ -0.08
TMEM235A6NFC5 STK25P1-201ENST00000585406 838 ntBASIC14.55□□□□□ -0.08
TMEM235A6NFC5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 AL390719.2-201ENST00000606993 987 ntBASIC14.55□□□□□ -0.08
TMEM235A6NFC5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM235A6NFC5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 AC024909.3-201ENST00000611513 2257 ntBASIC14.54□□□□□ -0.08
TMEM235A6NFC5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 KRT8P10-201ENST00000450021 1447 ntBASIC14.54□□□□□ -0.08
TMEM235A6NFC5 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.54□□□□□ -0.08
TMEM235A6NFC5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms