Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PALM3A6NDB9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PALM3A6NDB9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 SNX33P1-201ENST00000592116 1762 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 AC105020.1-201ENST00000435356 2205 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 HTR5BP-201ENST00000430851 1154 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 AC005829.1-201ENST00000570002 483 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 AL078644.1-201ENST00000609881 752 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 AC091812.2-201ENST00000619081 385 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.52■□□□□ 0.72
PALM3A6NDB9 AC092902.6-201ENST00000641783 218 ntBASIC19.52■□□□□ 0.72
PALM3A6NDB9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PALM3A6NDB9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PALM3A6NDB9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PALM3A6NDB9 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
PALM3A6NDB9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PALM3A6NDB9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PALM3A6NDB9 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 AC005915.1-201ENST00000624912 2018 ntBASIC19.51■□□□□ 0.71
PALM3A6NDB9 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 RNU1-129P-201ENST00000384064 167 ntBASIC19.51■□□□□ 0.71
PALM3A6NDB9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 MIR3687-2-201ENST00000577708 61 ntBASIC19.51■□□□□ 0.71
PALM3A6NDB9 U1.21-201ENST00000580816 167 ntBASIC19.51■□□□□ 0.71
PALM3A6NDB9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 AC006538.3-201ENST00000612495 578 ntBASIC19.51■□□□□ 0.71
PALM3A6NDB9 MIR3687-1-201ENST00000614492 61 ntBASIC19.51■□□□□ 0.71
PALM3A6NDB9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
PALM3A6NDB9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PALM3A6NDB9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 FAM58CP-201ENST00000435741 640 ntBASIC19.5■□□□□ 0.71
PALM3A6NDB9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 AP001350.2-201ENST00000625104 1094 ntBASIC19.5■□□□□ 0.71
PALM3A6NDB9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PALM3A6NDB9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
PALM3A6NDB9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms