Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 MYCLP1-201ENST00000372451 1075 ntBASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 AL136038.3-201ENST00000561909 1096 ntBASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC109462.3-201ENST00000573934 613 ntBASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC019129.2-201ENST00000609837 1235 ntBASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC125634.1-201ENST00000438758 1403 ntBASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF103-CHMP3A0A140T963 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 AL845331.1-201ENST00000424978 1190 ntBASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC011840.4-201ENST00000578471 627 ntBASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC005336.2-201ENST00000593183 939 ntBASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF103-CHMP3A0A140T963 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 KRT8P26-201ENST00000534154 1276 ntBASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 AL138831.2-201ENST00000606564 490 ntBASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 AL353801.3-201ENST00000609898 542 ntBASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RNF103-CHMP3A0A140T963 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms