Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 AC069148.1-201ENST00000608741 768 ntBASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 AC243591.1-201ENST00000452967 1364 ntBASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDHA3Q9Y5H8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 NUS1P2-201ENST00000417358 873 ntBASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 KRT16P4-201ENST00000453883 522 ntBASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 AL358472.4-201ENST00000633140 710 ntBASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 AC092364.2-201ENST00000596710 2692 ntBASIC17.75■□□□□ 0.43
PCDHA3Q9Y5H8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 AC013467.2-201ENST00000605472 835 ntBASIC17.74■□□□□ 0.43
PCDHA3Q9Y5H8 AP001269.4-201ENST00000609611 512 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms