Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 AC025678.2-201ENST00000562061 970 ntBASIC18.35■□□□□ 0.53
USP15Q9Y4E8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 AC092902.6-201ENST00000641783 218 ntBASIC18.35■□□□□ 0.53
USP15Q9Y4E8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 AP001094.4-201ENST00000579008 2176 ntBASIC18.35■□□□□ 0.53
USP15Q9Y4E8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USP15Q9Y4E8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 AL023806.1-201ENST00000603994 1649 ntBASIC18.34■□□□□ 0.53
USP15Q9Y4E8 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 OR7E47P-204ENST00000575924 449 ntBASIC18.34■□□□□ 0.53
USP15Q9Y4E8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 AC105339.1-204ENST00000636249 355 ntBASIC18.34■□□□□ 0.53
USP15Q9Y4E8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.34■□□□□ 0.53
USP15Q9Y4E8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP15Q9Y4E8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.33■□□□□ 0.53
USP15Q9Y4E8 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 AC003669.1-201ENST00000334569 611 ntBASIC18.33■□□□□ 0.52
USP15Q9Y4E8 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.33■□□□□ 0.52
USP15Q9Y4E8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 AC109322.1-201ENST00000524499 1264 ntBASIC18.33■□□□□ 0.52
USP15Q9Y4E8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 AC023141.13-201ENST00000604991 943 ntBASIC18.33■□□□□ 0.52
USP15Q9Y4E8 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 AC007064.4-201ENST00000637740 555 ntBASIC18.33■□□□□ 0.52
USP15Q9Y4E8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 AC018695.7-201ENST00000624587 2492 ntBASIC18.33■□□□□ 0.52
USP15Q9Y4E8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP15Q9Y4E8 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP15Q9Y4E8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms