Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 AC009078.2-202ENST00000463353 338 ntBASIC17.08■□□□□ 0.32
PKP3Q9Y446 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 AC012640.2-201ENST00000561606 901 ntBASIC17.08■□□□□ 0.32
PKP3Q9Y446 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 SLC25A6P4-201ENST00000586535 553 ntBASIC17.08■□□□□ 0.32
PKP3Q9Y446 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 AL121894.2-201ENST00000602977 491 ntBASIC17.08■□□□□ 0.32
PKP3Q9Y446 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 GGTLC5P-201ENST00000617623 998 ntBASIC17.08■□□□□ 0.32
PKP3Q9Y446 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.08■□□□□ 0.32
PKP3Q9Y446 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PKP3Q9Y446 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 AP002414.3-201ENST00000589352 1468 ntBASIC17.07■□□□□ 0.32
PKP3Q9Y446 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 FER1L4-210ENST00000615531 5998 ntBASIC17.07■□□□□ 0.32
PKP3Q9Y446 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 AL021920.2-201ENST00000624828 1351 ntBASIC17.07■□□□□ 0.32
PKP3Q9Y446 TUBB8P12-201ENST00000308911 1335 ntBASIC17.07■□□□□ 0.32
PKP3Q9Y446 TUBB7P-202ENST00000428444 1305 ntBASIC17.07■□□□□ 0.32
PKP3Q9Y446 TUBB8P7-204ENST00000567960 1332 ntBASIC17.07■□□□□ 0.32
PKP3Q9Y446 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 AC092910.1-201ENST00000482027 1129 ntBASIC17.07■□□□□ 0.32
PKP3Q9Y446 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PKP3Q9Y446 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.07■□□□□ 0.32
PKP3Q9Y446 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.06■□□□□ 0.32
PKP3Q9Y446 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 PAWRP1-201ENST00000451083 565 ntBASIC17.06■□□□□ 0.32
PKP3Q9Y446 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.06■□□□□ 0.32
PKP3Q9Y446 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PKP3Q9Y446 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms