Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CHTOPQ9Y3Y2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 REXO1L2P-201ENST00000425429 2069 ntBASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 AC004817.3-201ENST00000602957 2129 ntBASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 ZNRF2P3-201ENST00000424200 374 ntBASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 KRT18P23-201ENST00000435622 1283 ntBASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 FAM207BP-201ENST00000447172 505 ntBASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 AL050303.2-201ENST00000619798 666 ntBASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 OR2I1P-209ENST00000641730 5365 ntBASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CHTOPQ9Y3Y2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CHTOPQ9Y3Y2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 RARRES2P10-201ENST00000564312 460 ntBASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
CHTOPQ9Y3Y2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms