Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL138831.2-201ENST00000606564 490 ntBASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ALOX12P2-203ENST00000570921 1945 ntBASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
UBE2D4Q9Y2X8 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 AC132872.4-202ENST00000622924 2756 ntBASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 AC003669.1-201ENST00000334569 611 ntBASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 BX664615.1-201ENST00000443558 458 ntBASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 AC139887.4-201ENST00000607877 719 ntBASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 MTHFR-217ENST00000641820 1569 ntBASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UBE2D4Q9Y2X8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
UBE2D4Q9Y2X8 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms