Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 AC012569.1-201ENST00000591191 1524 ntBASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 BCAR1-209ENST00000546196 1340 ntBASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 AC004832.2-201ENST00000426397 482 ntBASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HDAC5Q9UQL6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 AC131009.4-201ENST00000624048 1740 ntBASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 MED16-214ENST00000617672 554 ntTSL 5 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HDAC5Q9UQL6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC21.14■□□□□ 0.98
HDAC5Q9UQL6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
HDAC5Q9UQL6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HDAC5Q9UQL6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 KRT19P2-202ENST00000557173 1012 ntBASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 PDPK2P-202ENST00000562415 1191 ntBASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 AC018845.2-201ENST00000568326 409 ntBASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 MTDHP5-201ENST00000598980 586 ntBASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HDAC5Q9UQL6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 AC025580.3-201ENST00000617932 1424 ntBASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 DNAJB3-201ENST00000446806 729 ntBASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 AC074386.1-202ENST00000463561 864 ntBASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.13■□□□□ 0.97
HDAC5Q9UQL6 LINC00895-201ENST00000629028 1637 ntBASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms