Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 AC092068.3-201ENST00000587894 2016 ntBASIC17.9■□□□□ 0.46
CDH9Q9ULB4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 AC004967.1-201ENST00000453589 447 ntBASIC17.9■□□□□ 0.46
CDH9Q9ULB4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 MIR4492-201ENST00000581627 80 ntBASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 AC134684.3-201ENST00000641758 218 ntBASIC17.9■□□□□ 0.46
CDH9Q9ULB4 AC092902.6-201ENST00000641783 218 ntBASIC17.9■□□□□ 0.46
CDH9Q9ULB4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.9■□□□□ 0.46
CDH9Q9ULB4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH9Q9ULB4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDH9Q9ULB4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDH9Q9ULB4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
CDH9Q9ULB4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.89■□□□□ 0.46
CDH9Q9ULB4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 CEND1P1-201ENST00000451006 455 ntBASIC17.89■□□□□ 0.45
CDH9Q9ULB4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDH9Q9ULB4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.88■□□□□ 0.45
CDH9Q9ULB4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH9Q9ULB4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms