Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC009336.1-201ENST00000608941 1553 ntBASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NIPSNAP3AQ9UFN0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 NORAD-201ENST00000565493 5339 ntBASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 TSPY22P-201ENST00000427496 604 ntBASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NIPSNAP3AQ9UFN0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL645929.1-201ENST00000420084 975 ntBASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 SPDYE13P-201ENST00000445314 798 ntBASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC005336.2-201ENST00000593183 939 ntBASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC006011.2-201ENST00000621313 1158 ntBASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 AC097493.4-201ENST00000641197 219 ntBASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NIPSNAP3AQ9UFN0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.27■□□□□ 0.19
NIPSNAP3AQ9UFN0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms