Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 SNHG9-202ENST00000564014 471 ntBASIC15.08■□□□□ 0
CLCF1Q9UBD9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 AC091167.2-201ENST00000579581 588 ntBASIC15.08■□□□□ 0
CLCF1Q9UBD9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 LINC00896-202ENST00000609602 2128 ntBASIC15.08■□□□□ 0
CLCF1Q9UBD9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCF1Q9UBD9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.08■□□□□ 0
CLCF1Q9UBD9 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 LINC02012-201ENST00000608206 1725 ntBASIC15.07■□□□□ 0
CLCF1Q9UBD9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 HMGA1P7-201ENST00000406908 502 ntBASIC15.07■□□□□ 0
CLCF1Q9UBD9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 CNN2P11-201ENST00000429351 262 ntBASIC15.07■□□□□ 0
CLCF1Q9UBD9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 AP000344.2-201ENST00000512987 629 ntBASIC15.07■□□□□ 0
CLCF1Q9UBD9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 PKD1P5-201ENST00000532415 10291 ntBASIC15.07■□□□□ 0
CLCF1Q9UBD9 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CLCF1Q9UBD9 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 AC012569.1-201ENST00000591191 1524 ntBASIC15.07■□□□□ 0
CLCF1Q9UBD9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.07■□□□□ 0
CLCF1Q9UBD9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 HCG4-201ENST00000418983 998 ntBASIC15.06■□□□□ 0
CLCF1Q9UBD9 ADH5P3-201ENST00000433842 1137 ntBASIC15.06■□□□□ 0
CLCF1Q9UBD9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.06■□□□□ 0
CLCF1Q9UBD9 AC124947.2-201ENST00000547118 1133 ntBASIC15.06■□□□□ 0
CLCF1Q9UBD9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.06■□□□□ 0
CLCF1Q9UBD9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLCF1Q9UBD9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms