Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 UPF3AP3-201ENST00000420996 769 ntBASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 AC124067.4-201ENST00000519691 2379 ntBASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.46■□□□□ 0.23
CUEDC1Q9NWM3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.46■□□□□ 0.22
CUEDC1Q9NWM3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CUEDC1Q9NWM3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 AC124947.2-201ENST00000547118 1133 ntBASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 AC005593.1-201ENST00000624894 515 ntBASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CUEDC1Q9NWM3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 PAWRP1-201ENST00000451083 565 ntBASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 IGHV3-22-201ENST00000520721 359 ntBASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 AC027796.2-201ENST00000575326 344 ntBASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 AL139384.1-201ENST00000612143 3047 ntBASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CUEDC1Q9NWM3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms