Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 EMBP1-201ENST00000458200 901 ntBASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCM2LQ9NUG4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 AL356309.3-201ENST00000624132 1934 ntBASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 MYCLP1-201ENST00000372451 1075 ntBASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 RASA4DP-201ENST00000460726 1199 ntBASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 AC034232.1-201ENST00000506026 1064 ntBASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CCM2LQ9NUG4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCM2LQ9NUG4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.21■□□□□ 0.18
CCM2LQ9NUG4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CCM2LQ9NUG4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.21■□□□□ 0.18
CCM2LQ9NUG4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CCM2LQ9NUG4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.21■□□□□ 0.18
CCM2LQ9NUG4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CCM2LQ9NUG4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms