Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 AC097493.3-201ENST00000509725 367 ntBASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 LINC01225-203ENST00000563550 1244 ntBASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 AC025048.6-201ENST00000634326 1161 ntBASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDLIM7Q9NR12 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 SERBP1P5-201ENST00000510079 1181 ntBASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 IGHV3-62-201ENST00000520057 340 ntBASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 AC108860.2-201ENST00000562760 2183 ntBASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 AC027307.3-201ENST00000594262 1100 ntBASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 AL023806.1-201ENST00000603994 1649 ntBASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 AC092053.1-201ENST00000605787 1936 ntBASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.87■□□□□ 0.61
PDLIM7Q9NR12 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 AC069120.2-201ENST00000524091 540 ntBASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 AC124947.2-201ENST00000547118 1133 ntBASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 SPDYE22P-201ENST00000582158 798 ntBASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDLIM7Q9NR12 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDLIM7Q9NR12 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms