Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 TPSP2-201ENST00000561760 610 ntBASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 AL049597.2-201ENST00000565575 961 ntBASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 AC005332.1-201ENST00000577698 1310 ntBASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
SLC52A3Q9NQ40 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 BX276092.5-203ENST00000456199 560 ntBASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 AC243591.1-201ENST00000452967 1364 ntBASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 NSUN5P1-202ENST00000421140 1535 ntBASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 NSUN5P2-203ENST00000457352 1529 ntBASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SLC52A3Q9NQ40 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 AL512652.2-201ENST00000625156 1716 ntBASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 KRT17P6-201ENST00000453795 1220 ntBASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 LINC01238-205ENST00000567549 1107 ntBASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 AL671710.1-201ENST00000610245 2349 ntBASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SLC52A3Q9NQ40 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SLC52A3Q9NQ40 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms