Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 NMU-202ENST00000505262 693 ntTSL 3 BASIC20■□□□□ 0.79
RNF41Q9H4P4 PGAM5P1-201ENST00000518923 814 ntBASIC20■□□□□ 0.79
RNF41Q9H4P4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20■□□□□ 0.79
RNF41Q9H4P4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
RNF41Q9H4P4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20■□□□□ 0.79
RNF41Q9H4P4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF41Q9H4P4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF41Q9H4P4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20■□□□□ 0.79
RNF41Q9H4P4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20■□□□□ 0.79
RNF41Q9H4P4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF41Q9H4P4 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 AC004877.2-201ENST00000623941 599 ntBASIC19.99■□□□□ 0.79
RNF41Q9H4P4 AL645728.2-201ENST00000641974 660 ntBASIC19.99■□□□□ 0.79
RNF41Q9H4P4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 BCAR1-209ENST00000546196 1340 ntBASIC19.99■□□□□ 0.79
RNF41Q9H4P4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF41Q9H4P4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 MIR4515-201ENST00000584082 81 ntBASIC19.98■□□□□ 0.79
RNF41Q9H4P4 AP001350.2-201ENST00000625104 1094 ntBASIC19.98■□□□□ 0.79
RNF41Q9H4P4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 AC131009.4-201ENST00000624048 1740 ntBASIC19.98■□□□□ 0.79
RNF41Q9H4P4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF41Q9H4P4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 PCDHB17P-201ENST00000539533 2393 ntBASIC19.97■□□□□ 0.79
RNF41Q9H4P4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 KRT19P2-202ENST00000557173 1012 ntBASIC19.97■□□□□ 0.79
RNF41Q9H4P4 AC087641.1-201ENST00000557561 1021 ntBASIC19.97■□□□□ 0.79
RNF41Q9H4P4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF41Q9H4P4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms