Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 AC148477.5-201ENST00000625164 1645 ntBASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC68Q9H2F9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 AC097637.2-201ENST00000624096 1997 ntBASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 AC132008.2-207ENST00000454517 770 ntBASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 NKILA-202ENST00000614771 2598 ntBASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC68Q9H2F9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC68Q9H2F9 AC079776.2-201ENST00000641154 1609 ntBASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 AP005117.1-201ENST00000584346 1413 ntBASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 PRELID1P1-202ENST00000567272 903 ntBASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC68Q9H2F9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 AL118508.1-201ENST00000613502 2345 ntBASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 LINC01711-201ENST00000598340 967 ntBASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC68Q9H2F9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms