Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FRMD8P1-201ENST00000440433 1524 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 ADH5P3-201ENST00000433842 1137 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 RFPL4AP1-201ENST00000530883 850 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AC093512.1-201ENST00000617969 520 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AC105339.1-204ENST00000636249 355 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 AC007064.4-201ENST00000637740 555 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 RNF216P1-203ENST00000404404 2427 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 EGFEM1P-202ENST00000431685 1563 ntBASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
KRTAP4-3Q9BYR4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 AC116353.5-201ENST00000638148 1699 ntBASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC5.75□□□□□ -1.49
KRTAP4-3Q9BYR4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms