Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 AL160237.2-201ENST00000556165 472 ntBASIC19.32■□□□□ 0.68
CCDC94Q9BW85 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 AC024909.3-201ENST00000611513 2257 ntBASIC19.32■□□□□ 0.68
CCDC94Q9BW85 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC94Q9BW85 AC010460.3-201ENST00000511359 1579 ntBASIC19.32■□□□□ 0.68
CCDC94Q9BW85 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 AC008608.2-201ENST00000606089 416 ntBASIC19.31■□□□□ 0.68
CCDC94Q9BW85 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 AC099063.4-201ENST00000641099 1602 ntBASIC19.31■□□□□ 0.68
CCDC94Q9BW85 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC94Q9BW85 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 RBM17P3-201ENST00000417687 1192 ntBASIC19.3■□□□□ 0.68
CCDC94Q9BW85 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 ABCD1P5-201ENST00000445663 754 ntBASIC19.3■□□□□ 0.68
CCDC94Q9BW85 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 AC104692.2-201ENST00000603054 253 ntBASIC19.3■□□□□ 0.68
CCDC94Q9BW85 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 KRT8P10-201ENST00000450021 1447 ntBASIC19.3■□□□□ 0.68
CCDC94Q9BW85 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC94Q9BW85 AC100803.2-201ENST00000562459 1963 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms