Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 ID1-201ENST00000376105 1233 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 TSPY12P-201ENST00000421279 868 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 TK2-204ENST00000525974 1178 ntTSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 BX088651.1-201ENST00000540551 451 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
LITAFQ99732 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.31□□□□□ -0.6
LITAFQ99732 AC024563.2-201ENST00000603282 481 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 CD177P1-201ENST00000606252 935 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 AL137784.2-201ENST00000607332 1000 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 GXYLT1P4-201ENST00000613576 1192 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 SNX18-202ENST00000343017 3140 ntBASIC11.31□□□□□ -0.6
LITAFQ99732 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC11.31□□□□□ -0.6
LITAFQ99732 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.31□□□□□ -0.6
LITAFQ99732 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LITAFQ99732 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LITAFQ99732 AC023908.3-201ENST00000564211 3047 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 AC006486.2-201ENST00000624246 2199 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 CDC14C-201ENST00000428251 1719 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
LITAFQ99732 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC11.3□□□□□ -0.6
LITAFQ99732 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
LITAFQ99732 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
LITAFQ99732 PON3-205ENST00000451904 1053 ntTSL 3 BASIC11.3□□□□□ -0.6
LITAFQ99732 MMAB-206ENST00000540016 945 ntTSL 3 BASIC11.3□□□□□ -0.6
LITAFQ99732 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC11.3□□□□□ -0.6
LITAFQ99732 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC11.3□□□□□ -0.6
LITAFQ99732 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 AC004263.2-201ENST00000617183 678 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 AL157888.1-201ENST00000631930 593 ntBASIC11.3□□□□□ -0.6
LITAFQ99732 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LITAFQ99732 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LITAFQ99732 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms