Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 AC005412.3-201ENST00000580309 715 ntBASIC16.45■□□□□ 0.22
SLC38A3Q99624 MIR4515-201ENST00000584082 81 ntBASIC16.45■□□□□ 0.22
SLC38A3Q99624 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 REXO1L3P-201ENST00000622202 1288 ntBASIC16.45■□□□□ 0.22
SLC38A3Q99624 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC38A3Q99624 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC38A3Q99624 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 METTL21AP1-201ENST00000438852 635 ntBASIC16.44■□□□□ 0.22
SLC38A3Q99624 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC38A3Q99624 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC38A3Q99624 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 AP000344.2-201ENST00000512987 629 ntBASIC16.43■□□□□ 0.22
SLC38A3Q99624 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SLC38A3Q99624 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC38A3Q99624 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC38A3Q99624 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.42■□□□□ 0.22
SLC38A3Q99624 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms