Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDCA3Q99618 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA3Q99618 AP006294.1-201ENST00000415407 339 ntBASIC17.5■□□□□ 0.39
CDCA3Q99618 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.5■□□□□ 0.39
CDCA3Q99618 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.5■□□□□ 0.39
CDCA3Q99618 AC011495.1-201ENST00000498085 584 ntBASIC17.5■□□□□ 0.39
CDCA3Q99618 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA3Q99618 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA3Q99618 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA3Q99618 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA3Q99618 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA3Q99618 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA3Q99618 AC093525.9-201ENST00000624961 1746 ntBASIC17.5■□□□□ 0.39
CDCA3Q99618 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA3Q99618 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA3Q99618 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDCA3Q99618 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA3Q99618 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA3Q99618 AC135586.1-201ENST00000539323 574 ntBASIC17.49■□□□□ 0.39
CDCA3Q99618 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA3Q99618 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.49■□□□□ 0.39
CDCA3Q99618 AC105021.1-202ENST00000570572 669 ntBASIC17.49■□□□□ 0.39
CDCA3Q99618 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CDCA3Q99618 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.49■□□□□ 0.39
CDCA3Q99618 AC004840.1-201ENST00000636359 365 ntBASIC17.49■□□□□ 0.39
CDCA3Q99618 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CDCA3Q99618 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA3Q99618 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDCA3Q99618 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCA3Q99618 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDCA3Q99618 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCA3Q99618 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.48■□□□□ 0.39
CDCA3Q99618 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCA3Q99618 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.48■□□□□ 0.39
CDCA3Q99618 AC093004.1-201ENST00000508850 424 ntBASIC17.48■□□□□ 0.39
CDCA3Q99618 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCA3Q99618 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.48■□□□□ 0.39
CDCA3Q99618 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCA3Q99618 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.48■□□□□ 0.39
CDCA3Q99618 AC017083.2-201ENST00000608069 979 ntBASIC17.48■□□□□ 0.39
CDCA3Q99618 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 AL162274.1-201ENST00000617191 1098 ntBASIC17.48■□□□□ 0.39
CDCA3Q99618 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 TNXA-203ENST00000507684 2038 ntBASIC17.48■□□□□ 0.39
CDCA3Q99618 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CDCA3Q99618 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CDCA3Q99618 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CDCA3Q99618 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CDCA3Q99618 AL355312.1-201ENST00000407115 2176 ntBASIC17.47■□□□□ 0.39
CDCA3Q99618 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CDCA3Q99618 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 HCG11-201ENST00000411553 5696 ntBASIC17.47■□□□□ 0.39
CDCA3Q99618 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.47■□□□□ 0.39
CDCA3Q99618 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CDCA3Q99618 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 RN7SL752P-201ENST00000463779 287 ntBASIC17.47■□□□□ 0.39
CDCA3Q99618 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.47■□□□□ 0.39
CDCA3Q99618 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA3Q99618 AL079307.3-201ENST00000556114 283 ntBASIC17.47■□□□□ 0.39
CDCA3Q99618 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCA3Q99618 AC104794.3-201ENST00000566840 1248 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms