Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 AL596087.1-201ENST00000400979 1969 ntBASIC16.05■□□□□ 0.16
NR1H4Q96RI1 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NR1H4Q96RI1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 AP005117.1-202ENST00000581724 1908 ntBASIC16.04■□□□□ 0.16
NR1H4Q96RI1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 AC091390.4-202ENST00000476426 537 ntBASIC16.04■□□□□ 0.16
NR1H4Q96RI1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 AP002490.2-201ENST00000524791 560 ntBASIC16.04■□□□□ 0.16
NR1H4Q96RI1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 CICP4-201ENST00000447359 2812 ntBASIC16.04■□□□□ 0.16
NR1H4Q96RI1 PPT1-215ENST00000641471 2368 ntBASIC16.04■□□□□ 0.16
NR1H4Q96RI1 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NR1H4Q96RI1 AC010491.1-201ENST00000563101 2797 ntBASIC16.04■□□□□ 0.16
NR1H4Q96RI1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC006058.3-201ENST00000606217 1069 ntBASIC16.03■□□□□ 0.16
NR1H4Q96RI1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC124016.1-201ENST00000609552 612 ntBASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC110285.5-201ENST00000611501 352 ntBASIC16.03■□□□□ 0.16
NR1H4Q96RI1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 BX276092.7-203ENST00000637198 1536 ntBASIC16.03■□□□□ 0.16
NR1H4Q96RI1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.03■□□□□ 0.16
NR1H4Q96RI1 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NR1H4Q96RI1 LINC00167-201ENST00000530583 1419 ntBASIC16.02■□□□□ 0.16
NR1H4Q96RI1 KRT8P7-201ENST00000533003 1432 ntBASIC16.02■□□□□ 0.16
NR1H4Q96RI1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.02■□□□□ 0.16
NR1H4Q96RI1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H4Q96RI1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NR1H4Q96RI1 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.02■□□□□ 0.16
NR1H4Q96RI1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms