Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
DDX11Q96FC9 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
DDX11Q96FC9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.83
DDX11Q96FC9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 SIGLEC16-201ENST00000599858 1437 ntBASIC20.2■□□□□ 0.82
DDX11Q96FC9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 AC007967.2-201ENST00000432613 625 ntBASIC20.2■□□□□ 0.82
DDX11Q96FC9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 PGM5P2-202ENST00000637225 1043 ntBASIC20.2■□□□□ 0.82
DDX11Q96FC9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 AC092068.3-201ENST00000587894 2016 ntBASIC20.2■□□□□ 0.82
DDX11Q96FC9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DDX11Q96FC9 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX11Q96FC9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 UPF3AP3-201ENST00000420996 769 ntBASIC20.19■□□□□ 0.82
DDX11Q96FC9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 AC009947.1-201ENST00000444350 727 ntBASIC20.19■□□□□ 0.82
DDX11Q96FC9 AC040169.1-201ENST00000565382 521 ntBASIC20.19■□□□□ 0.82
DDX11Q96FC9 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 AC148477.5-201ENST00000625164 1645 ntBASIC20.19■□□□□ 0.82
DDX11Q96FC9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX11Q96FC9 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX11Q96FC9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 AC003669.1-201ENST00000334569 611 ntBASIC20.18■□□□□ 0.82
DDX11Q96FC9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 AL020989.1-201ENST00000422979 469 ntBASIC20.18■□□□□ 0.82
DDX11Q96FC9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.18■□□□□ 0.82
DDX11Q96FC9 AC092183.1-201ENST00000469884 875 ntBASIC20.18■□□□□ 0.82
DDX11Q96FC9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX11Q96FC9 AL691403.2-201ENST00000618460 490 ntBASIC20.18■□□□□ 0.82
DDX11Q96FC9 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX11Q96FC9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms